Use this to save results when estimating log-ratios for microarray data. These results are saved when an analysis is run and must be specified before running an analysis.
- After selecting the appropriate boxes, type names for the data structures into the corresponding In fields.
Save
The table below indicates the type of structures formed for each item.
| Probe/Gene IDs | Factor | The list of probes/gene identifiers to index the results. |
| Estimates | Pointer | The estimates will be saved in unnamed variates pointed to by this pointer. There will be one variate for each treatment/target. |
| Standard errors of estimates | Pointer | The standard errors of the estimates will be saved in unnamed variates pointed to by this pointer. There will be one variate for each treatment/target. |
| Residual degrees of freedom | Variate | The residual degrees of freedom from the ANOVA for each probe/gene. |
| Residual standard deviation | Variate | The square root of the residual mean square from the ANOVA for each probe/gene. |
| Dye bias effects | Variate | The estimated dye bias effects for each probe/gene. |
| t-values | Pointer | The t-values (the estimates divided by their standard errors) will be saved in unnamed variates pointed to by this pointer. There will be one variate for each treatment/target. |
| Probabilities of estimates | Pointer | The two sided probabilities of a t-value of the estimates being more extreme than the observed t-values will be saved in unnamed variates pointed to by this pointer. There will be one variate for each treatment/target. |
| Contrast estimates | Pointer | The contrast estimates will be saved in unnamed variates pointed to by this pointer. There will be one variate for each contrast. |
| Contrast t-values | Pointer | The contrast t-values (the contrasts divided by their standard errors) will be saved in unnamed variates pointed to by this pointer. There will be one variate for each contrast. |
| Probabilities of contrast estimates | Pointer | The two sided probabilities of contrast t-values being more extreme than the observed t-values will be saved in unnamed variates pointed to by this pointer. There will be one variate for each contrast. |
Display in spreadsheet
Select this to display the results in a new spreadsheet window.
Action Icons
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